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Schema
Citing CMDGA
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Assay category
3
DNA methylation
2
DNA accessibility
Assay
145
ChIP-seq
20
ATAC-seq
3
WGBS
2
DNase-seq
Hi-C
1
RRBS
1
pCHi-C
Project
6
AMP
RFA
6
AMP
Experiment status
6
released
Genome assembly (visualization)
2
GRCh38
2
hg19
Organism
6
Homo sapiens
Biosample type
6
tissue
Organ
6
liver
Life stage
2
adult
2
embryonic
1
child
1
unknown
Available data
3
fastq
2
bam
2
bed bed3+
2
bed broadPeak
2
bed narrowPeak
2
bigBed broadPeak
2
bigBed narrowPeak
2
bigWig
1
tsv
Platform
2
Illumina HiSeq 2500
1
Illumina HiSeq 2000
1
Illumina HiSeq 4000
Run type
2
paired-ended
1
single-ended
Read length (nt)
2
36
1
100
Library made from
6
DNA
Date released
3
August, 2017
2
November, 2018
1
March, 2020
Lab
6
AMP-T2D consortium
Replication type
4
unreplicated
2
anisogenic
assay_title!
Hi-C
Showing 6 of 6 results
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Experiment
DSR534MRK
released
pCHi-C
of liver
Homo sapiens
liver
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR004CBL
released
DNase-seq
of liver
Homo sapiens
liver embryo (59 days) and embryo (80 days)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR869ANN
released
DNase-seq
of liver
Homo sapiens
liver female embryo (113 days)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR621783
released
WGBS
of liver
Homo sapiens
liver male child (3 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR259530
released
WGBS
of liver
Homo sapiens
liver female adult (25 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR873184
released
WGBS
of liver
Homo sapiens
liver male adult (31 year)
Lab:
AMP-T2D consortium
Project:
AMP