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Schema
Citing CMDGA
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Assay category
3
DNA binding
1
DNA accessibility
Assay
3
ChIP-seq
1
DNase-seq
Project
4
AMP
RFA
4
AMP
Experiment status
4
released
Genome assembly (visualization)
4
GRCh38
4
hg19
Organism
4
Homo sapiens
Target of assay
2
transcription factor
1
control
Biosample type
4
tissue
Organ
4
liver
Life stage
3
unknown
1
embryonic
Available data
271
bam
251
bigWig
149
tsv
103
bed narrowPeak
70
fastq
70
tagAlign
39
bigBed narrowPeak
4
bed bed3+
1
bed bedMethyl
1
bed broadPeak
1
bedpe bed3+
1
bigBed bedMethyl
1
bigBed broadPeak
1
csv
1
hic
Platform
2
Illumina Genome Analyzer
1
Illumina Genome Analyzer II
1
Illumina HiSeq 2000
1
Illumina HiSeq 2500
Illumina HiSeq 4000
Run type
3
single-ended
1
paired-ended
Read length (nt)
2
32
2
36
Library made from
4
DNA
Date released
3
August, 2017
1
November, 2018
Lab
4
AMP-T2D consortium
Replication type
4
anisogenic
files.platform.term_name!
Illumina HiSeq 4000
Showing 4 of 4 results
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Experiment
TSTSR004CBL
released
DNase-seq
of liver
Homo sapiens
liver embryo (59 days) and embryo (80 days)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR629646
released
ChIP-seq
of liver
Homo sapiens
liver
Target:
FOXA2
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR138850
released
ChIP-seq
of liver
Homo sapiens
liver
Target:
FOXA2
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR212220
released
ChIP-seq
of liver
Homo sapiens
liver
Target:
Control
Lab:
AMP-T2D consortium
Project:
AMP