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Citing CMDGA
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Assay category
3
DNA accessibility
Assay
13
ChIP-seq
7
total RNA-seq
3
ATAC-seq
2
WGBS
2
single cell RNA-seq
Project
3
AMP
RFA
3
AMP
Experiment status
3
released
Genome assembly (visualization)
3
GRCh38
3
hg19
Organism
3
Homo sapiens
Biosample type
3
primary cell
Organ
3
epithelium
3
pancreas
Life stage
adult
2
unknown
1
child
Available data
3
bam
3
bed narrowPeak
3
bigBed narrowPeak
3
bigWig
3
fastq
Platform
2
Illumina NextSeq 500
1
Illumina HiSeq 2000
Run type
3
paired-ended
Read length (nt)
2
41
2
50
1
102
Library made from
3
DNA
Date released
May, 2022
2
September, 2017
1
September, 2018
Lab
3
AMP-T2D consortium
Replication type
3
unreplicated
replicates.library.biosample.life_stage!
adult
month_released!
May, 2022
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Experiment
TSTSR351IAS
released
ATAC-seq
of pancreatic alpha cell
Homo sapiens
pancreatic alpha cell male child (17 months)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR794793
released
ATAC-seq
of pancreatic alpha cell
Homo sapiens
pancreatic alpha cell
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR855058
released
ATAC-seq
of pancreatic alpha cell
Homo sapiens
pancreatic alpha cell
Lab:
AMP-T2D consortium
Project:
AMP