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Assay category
6
Transcription
Assay
17
ATAC-seq
13
ChIP-seq
10
single cell RNA-seq
6
total RNA-seq
1
Hi-C
Project
5
AMP
1
HPAP
RFA
5
AMP
1
HPAP
Experiment status
6
released
Genome assembly (visualization)
5
GRCh38
5
hg19
Organism
6
Homo sapiens
Biosample type
6
primary cell
Organ
6
epithelium
6
pancreas
Life stage
6
adult
child
Available data
6
fastq
5
bam
5
bigWig
5
tsv
Platform
Illumina NovaSeq 6000
5
Illumina HiSeq 2000
1
Illumina HiSeq 4000
Run type
5
paired-ended
1
single-ended
Read length (nt)
5
101
1
100
Library made from
6
RNA
Date released
5
September, 2018
1
September, 2020
Lab
5
AMP-T2D consortium
1
Klaus Kaestner, Upenn
Replication type
6
unreplicated
files.platform.term_name!
Illumina NovaSeq 6000
replicates.library.biosample.life_stage!
child
Showing 6 of 6 results
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Experiment
DSR724MGA
released
total RNA-seq
of pancreatic beta cell
Homo sapiens
pancreatic beta cell female adult (39 years)
Lab:
Klaus Kaestner, Upenn
Project:
HPAP
Experiment
TSTSR913UGN
released
total RNA-seq
of pancreatic beta cell
Homo sapiens
pancreatic beta cell adult (66 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR555ABY
released
total RNA-seq
of pancreatic beta cell
Homo sapiens
pancreatic beta cell adult (48 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR427PQE
released
total RNA-seq
of pancreatic beta cell
Homo sapiens
pancreatic beta cell adult (40 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR554FOC
released
total RNA-seq
of pancreatic beta cell
Homo sapiens
pancreatic beta cell adult (28 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR184ASA
released
total RNA-seq
of pancreatic beta cell
Homo sapiens
pancreatic beta cell adult (33 years)
Lab:
AMP-T2D consortium
Project:
AMP