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Schema
Citing CMDGA
Clear Filters
Assay category
3
DNA binding
Assay
3
ChIP-seq
1
GRO-seq
Project
4
AMP
RFA
4
AMP
Experiment status
4
released
Genome assembly (visualization)
2
GRCh38
2
hg19
1
hg18
Organism
4
Homo sapiens
Target of assay
2
transcription factor
1
control
Biosample type
4
in vitro differentiated cells
Organ
4
embryo
Life stage
4
embryonic
4
unknown
Available data
4
fastq
3
bam
3
bigWig
2
bed narrowPeak
Platform
4
Illumina HiSeq 2500
Run type
4
single-ended
Read length (nt)
5
36
5
50
Library made from
4
DNA
Date released
3
December, 2017
1
January, 2018
Lab
4
AMP-T2D consortium
Replication type
4
unreplicated
Audit category:
1
inconsistent control read length
audit.NOT_COMPLIANT.category!
missing controlled_by
files.read_length!
36
Showing 4 of 4 results
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Experiment
TSTSR171680
released
GRO-seq
of pancreatic endoderm
Homo sapiens
pancreatic endoderm
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR303983
released
ChIP-seq
of pancreatic endoderm
Homo sapiens
pancreatic endoderm
Target:
PDX1
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR236798
released
ChIP-seq
of pancreatic endoderm
Homo sapiens
pancreatic endoderm
Target:
Control
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR209943
released
Audit warning
1
ChIP-seq
of pancreatic endoderm
Homo sapiens
pancreatic endoderm
Target:
FOXA2
Lab:
AMP-T2D consortium
Project:
AMP