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Schema
Citing CMDGA
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Assay category
4
DNA binding
Assay
4
ChIP-seq
Project
4
AMP
RFA
4
AMP
Experiment status
4
released
Genome assembly (visualization)
4
GRCh38
4
hg19
Organism
4
Homo sapiens
Target of assay
3
transcription factor
1
histone
1
histone modification
1
narrow histone mark
Biosample type
4
in vitro differentiated cells
Organ
4
embryo
Life stage
4
unknown
Available data
10
fastq
9
bam
7
bigWig
6
bed narrowPeak
bed bed3+
Platform
6
Illumina Genome Analyzer IIx
4
Illumina HiSeq 2500
Run type
4
single-ended
Read length (nt)
2
36
2
50
Library made from
4
DNA
Date released
4
December, 2017
Lab
4
AMP-T2D consortium
Replication type
4
unreplicated
Audit category:
1
inconsistent control read length
files.file_type!
bed bed3+
Showing 4 of 4 results
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Experiment
TSTSR303983
released
ChIP-seq
of pancreatic endoderm
Homo sapiens
pancreatic endoderm
Target:
PDX1
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR522624
released
ChIP-seq
of pancreatic endoderm
Homo sapiens
pancreatic endoderm
Target:
H3K27ac
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR209943
released
Audit warning
1
ChIP-seq
of pancreatic endoderm
Homo sapiens
pancreatic endoderm
Target:
FOXA2
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR927554
released
ChIP-seq
of pancreatic endoderm
Homo sapiens
pancreatic endoderm
Target:
FOXA1
Lab:
AMP-T2D consortium
Project:
AMP