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Citing CMDGA
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Assay category
2
DNA accessibility
Assay
160
ATAC-seq
115
total RNA-seq
108
ChIP-seq
89
single cell RNA-seq
56
snATAC-seq
47
WGBS
31
pCHi-C
18
Hi-C
10
RRBS
6
MeRIP-seq
5
GRO-seq
5
STARR-seq
4
Capture-C
3
CRISPR genome editing followed by DNA sequencing
2
DNase-seq
2
HiChIP
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
DNAme array
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Project
2
AMP
RFA
2
AMP
Experiment status
2
released
Organism
2
Homo sapiens
Biosample type
2
primary cell
tissue
Organ
2
epithelium
2
kidney
Life stage
2
adult
Available data
bam
32
bed narrowPeak
32
bigBed narrowPeak
32
bigWig
30
bed broadPeak
30
bigBed broadPeak
28
bed bed3+
2
fastq
Library made from
2
DNA
Date released
2
October, 2019
Lab
2
AMP-T2D consortium
Replication type
2
anisogenic
biosample_type!
tissue
files.file_type!
bam
Showing 2 of 2 results
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Experiment
DSR920RBU
released
DNase-seq
of kidney glomerular epithelial cell
Homo sapiens
kidney glomerular epithelial cell male adult (46 years) and male adult (62 years) and male adult (63 years) and male adult (65 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR290FAD
released
DNase-seq
of kidney tubule cell
Homo sapiens
kidney tubule cell female adult (80 years) and male adult (62 years) and male adult (63 years)
Lab:
AMP-T2D consortium
Project:
AMP