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Schema
Citing CMDGA
Clear Filters
Assay category
6
DNA accessibility
Assay
79
ChIP-seq
19
ATAC-seq
19
total RNA-seq
6
DNase-seq
4
pCHi-C
4
single cell RNA-seq
2
Capture-C
1
RRBS
1
small RNA-seq
Project
6
AMP
RFA
6
AMP
Experiment status
6
released
Genome assembly (visualization)
6
GRCh38
5
hg19
Organism
6
Homo sapiens
Biosample type
5
primary cell
tissue
1
in vitro differentiated cells
Organ
19
epithelium
13
kidney
7
connective tissue
6
vasculature
brain
4
blood vessel
3
heart
2
liver
2
vein
1
eye
1
musculature of body
1
pancreas
Life stage
3
unknown
2
adult
1
embryonic
Available data
6
bam
6
bed broadPeak
6
bed narrowPeak
6
bigBed broadPeak
6
bigBed narrowPeak
6
bigWig
5
bed bed3+
1
fastq
Platform
1
Illumina HiSeq 2000
Run type
1
paired-ended
Read length (nt)
1
36
Library made from
6
DNA
Date released
4
June, 2019
1
August, 2017
1
November, 2020
Lab
6
AMP-T2D consortium
Replication type
3
isogenic
2
unreplicated
1
anisogenic
Audit category:
1
inconsistent ontology term
biosample_type!
tissue
organ_slims!
brain
Showing 6 of 6 results
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Experiment
DSR457QKP
released
DNase-seq
of osteoblast
Homo sapiens
osteoblast
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR110FEN
released
DNase-seq
of cardiac fibroblast
Homo sapiens
cardiac fibroblast female embryo (94 days) and female embryo (98 days)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR921CZK
released
DNase-seq
of cardiac fibroblast
Homo sapiens
cardiac fibroblast female adult
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR712MHV
released
Audit error
1
DNase-seq
of cardiac fibroblast
Homo sapiens
cardiac fibroblast
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR762OSH
released
DNase-seq
of hepatic stellate cell
Homo sapiens
hepatic stellate cell female adult (59 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR999372
released
DNase-seq
of adipocyte
Homo sapiens
adipocyte
Lab:
AMP-T2D consortium
Project:
AMP