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Citing CMDGA
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Assay category
2
Transcription
1
DNA accessibility
Assay
198
ChIP-seq
136
total RNA-seq
42
ATAC-seq
5
pCHi-C
4
GRO-seq
4
Hi-C
2
Capture-C
2
single cell RNA-seq
1
DNase-seq
Project
3
AMP
RFA
3
AMP
Experiment status
3
released
Genome assembly (visualization)
1
GRCh38
1
hg19
Organism
3
Homo sapiens
Biosample type
352
tissue
218
primary cell
3
in vitro differentiated cells
2
cell line
Organ
1
connective tissue
Life stage
3
unknown
Available data
2
tsv
1
bam
1
bed broadPeak
1
bed narrowPeak
1
bigBed broadPeak
1
bigBed narrowPeak
1
bigWig
1
fastq
Platform
1
Illumina HiSeq 2000
Run type
1
paired-ended
Read length (nt)
1
36
Library made from
2
RNA
1
DNA
Date released
2
December, 2019
1
August, 2017
Lab
3
AMP-T2D consortium
Replication type
3
isogenic
Audit category:
2
audit script error
2
inconsistent ontology term
Showing 3 of 3 results
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Experiment
DSR690SBQ
released
Audit error
2
single cell RNA-seq
of cardiomyocytes (cardiac muscle cell)
Homo sapiens
cardiomyocytes (cardiac muscle cell)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR054HMA
released
Audit error
2
single cell RNA-seq
of cardiomyocytes (cardiac muscle cell)
Homo sapiens
cardiomyocytes (cardiac muscle cell)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR999372
released
DNase-seq
of adipocyte
Homo sapiens
adipocyte
Lab:
AMP-T2D consortium
Project:
AMP