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Citing CMDGA
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Assay category
5
DNA binding
Assay
5
ChIP-seq
1
GRO-seq
Project
6
AMP
RFA
6
AMP
Experiment status
6
released
Genome assembly (visualization)
5
GRCh38
5
hg19
1
hg18
Organism
6
Homo sapiens
Target of assay
2
histone
2
histone modification
2
transcription factor
1
broad histone mark
1
control
1
narrow histone mark
Biosample type
6
in vitro differentiated cells
Life stage
6
unknown
Available data
6
fastq
5
bam
5
bigWig
4
bed narrowPeak
3
bed bed3+
Platform
6
Illumina HiSeq 2500
Run type
6
single-ended
Read length (nt)
4
36
3
50
Library made from
6
DNA
Date released
5
December, 2017
1
January, 2018
Lab
6
AMP-T2D consortium
Replication type
3
isogenic
3
unreplicated
Audit category:
2
inconsistent control read length
organ_slims!
liver
Showing 6 of 6 results
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Experiment
TSTSR520547
released
GRO-seq
of Posterior foregut
Homo sapiens
Posterior foregut
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR729604
released
Audit warning
1
ChIP-seq
of Posterior foregut
Homo sapiens
Posterior foregut
Target:
H3K4me1
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR186936
released
ChIP-seq
of Posterior foregut
Homo sapiens
Posterior foregut
Target:
H3K27ac
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR376587
released
Audit warning
1
ChIP-seq
of Posterior foregut
Homo sapiens
Posterior foregut
Target:
FOXA2
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR136347
released
ChIP-seq
of Posterior foregut
Homo sapiens
Posterior foregut
Target:
FOXA1
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR028559
released
ChIP-seq
of Posterior foregut
Homo sapiens
Posterior foregut
Target:
Control
Lab:
AMP-T2D consortium
Project:
AMP