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Assay category
2
Transcription
1
DNA accessibility
Assay
254
ChIP-seq
243
total RNA-seq
188
ATAC-seq
180
single cell RNA-seq
56
snATAC-seq
47
WGBS
28
DNase-seq
16
pCHi-C
10
Hi-C
8
RRBS
2
small RNA-seq
1
DNAme array
1
FAIRE-seq
Project
3
AMP
RFA
3
AMP
Experiment status
3
released
Genome assembly (visualization)
3
hg19
2
GRCh38
Organism
3
Homo sapiens
Biosample type
20
tissue
3
primary cell
Organ
1
adipose tissue
1
blood vessel
1
connective tissue
1
epithelium
1
musculature of body
1
vasculature
1
vein
Life stage
2
adult
1
newborn
Available data
3
bam
3
bigWig
2
tsv
1
bed narrowPeak
1
bigBed narrowPeak
1
tar
Library made from
2
RNA
1
DNA
Date released
2
July, 2019
1
October, 2019
Lab
3
AMP-T2D consortium
Replication type
2
anisogenic
1
isogenic
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Experiment
DSR024UHG
released
FAIRE-seq
of endothelial cell of umbilical vein
Homo sapiens
endothelial cell of umbilical vein newborn
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR207MHZ
released
small RNA-seq
of skeletal muscle satellite cell
Homo sapiens
skeletal muscle satellite cell female adult (64 years) and male adult (21 year)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR483BAA
released
small RNA-seq
of mesenchymal stem cell of adipose
Homo sapiens
mesenchymal stem cell of adipose female adult (37 years) and female adult (42 years)
Lab:
AMP-T2D consortium
Project:
AMP