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Schema
Citing CMDGA
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Assay category
6
3D chromatin structure
Assay
162
ChIP-seq
151
ATAC-seq
102
single cell RNA-seq
57
total RNA-seq
31
DNase-seq
10
RRBS
6
Hi-C
2
small RNA-seq
1
DNAme array
1
FAIRE-seq
1
pCHi-C
Project
6
AMP
RFA
6
AMP
Experiment status
6
released
Genome assembly (visualization)
6
hg19
Organism
6
Homo sapiens
Biosample type
13
tissue
6
primary cell
4
in vitro differentiated cells
3
cell line
Organ
4
blood vessel
4
epithelium
4
vasculature
3
brain
2
vein
1
connective tissue
1
liver
Life stage
6
unknown
Available data
4
bed bed3+
4
bigWig
4
hdf5
2
hic
1
bedpe bed3+
Library made from
6
DNA
Date released
4
July, 2019
1
March, 2020
1
October, 2019
Lab
6
AMP-T2D consortium
3
Klaus Kaestner, Upenn
1
ITG
Replication type
4
isogenic
1
anisogenic
1
unreplicated
Audit category:
1
audit script error
Showing 6 of 6 results
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Experiment
DSR430XOJ
released
Hi-C
of endothelial cell of umbilical vein
Homo sapiens
endothelial cell of umbilical vein
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR251SCT
released
Audit error
1
Hi-C
of endothelial cell of umbilical vein
Homo sapiens
endothelial cell of umbilical vein
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR770TGA
released
Hi-C
of brain pericyte
Homo sapiens
brain pericyte
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR270TQF
released
Hi-C
of astrocyte of the cerebellum
Homo sapiens
astrocyte of the cerebellum
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR933OWU
released
Hi-C
of endothelial cell of hepatic sinusoid
Homo sapiens
endothelial cell of hepatic sinusoid
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR240JNB
released
Hi-C
of brain microvascular endothelial cell
Homo sapiens
brain microvascular endothelial cell
Lab:
AMP-T2D consortium
Project:
AMP