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Citing CMDGA
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Assay category
4
3D chromatin structure
Assay
289
total RNA-seq
117
ChIP-seq
62
ATAC-seq
11
snATAC-seq
7
DNase-seq
4
Hi-C
4
MeRIP-seq
4
WGBS
2
FAIRE-seq
2
RRBS
2
small RNA-seq
1
pCHi-C
Project
4
AMP
RFA
2
AMP
2
AMP2
Experiment status
4
released
Genome assembly (visualization)
3
hg19
Organism
4
Homo sapiens
Biosample type
4
tissue
3
primary cell
2
cell line
Organ
6
musculature of body
4
limb
4
pancreas
3
heart
1
blood vessel
1
kidney
1
liver
1
vasculature
Life stage
4
adult
Available data
3
bedpe bed3+
3
hic
1
bedpe
Library made from
4
DNA
Date released
1
August, 2021
1
March, 2019
1
March, 2020
1
November, 2019
Lab
2
AMP-T2D consortium
2
Bing Ren, UCSD
Replication type
3
anisogenic
1
unreplicated
Showing 4 of 4 results
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Experiment
DSR942HZR
released
Hi-C
of islet of Langerhans
Homo sapiens
islet of Langerhans female adult (56 years) and female adult (59 years) and male adult (53 years)
Lab:
Bing Ren, UCSD
Project:
AMP
Experiment
DSR905BNL
released
Hi-C
of pancreas
Homo sapiens
pancreas female adult (30 years) and male adult (34 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR951IJE
released
Hi-C
of islet of Langerhans
Homo sapiens
islet of Langerhans female adult (43 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR043623
released
Hi-C
of islet of Langerhans
Homo sapiens
islet of Langerhans female adult (56 years) and female adult (59 years) and male adult (53 years)
Lab:
Bing Ren, UCSD
Project:
AMP