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Citing CMDGA
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Assay category
4
DNA accessibility
Assay
176
ChIP-seq
89
total RNA-seq
9
WGBS
5
RRBS
2
ATAC-seq
2
DNase-seq
1
FAIRE-seq
Project
4
AMP
RFA
4
AMP
Experiment status
4
released
Genome assembly (visualization)
3
GRCh38
3
hg19
Organism
4
Homo sapiens
Biosample type
5
primary cell
4
tissue
1
in vitro differentiated cells
Organ
2
liver
1
adipose tissue
1
connective tissue
1
pancreas
Life stage
3
adult
1
unknown
Available data
3
bam
3
bed narrowPeak
3
bigBed narrowPeak
3
bigWig
3
fastq
Platform
2
Illumina HiSeq 4000
1
Illumina Genome Analyzer
Run type
2
paired-ended
1
single-ended
Read length (nt)
2
100
1
20
Library insert size (nt)
1
150-250
Library made from
4
DNA
Date released
163
June, 2019
79
February, 2023
64
August, 2021
38
May, 2022
20
November, 2019
20
October, 2019
11
May, 2023
9
November, 2018
8
February, 2021
8
October, 2017
6
July, 2019
4
August, 2017
4
March, 2019
2
January, 2018
2
March, 2020
Lab
4
AMP-T2D consortium
Replication type
3
unreplicated
1
anisogenic
Showing 4 of 4 results
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Experiment
TSTSR560092
released
ATAC-seq
of subcutaneous adipose tissue
Homo sapiens
subcutaneous adipose tissue female adult (53 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR715510
released
DNase-seq
of right lobe of liver
Homo sapiens
right lobe of liver female adult (53 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR622315
released
ATAC-seq
of right lobe of liver
Homo sapiens
right lobe of liver female adult (53 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR171380
released
DNase-seq
of islet of Langerhans
Homo sapiens
islet of Langerhans
Lab:
AMP-T2D consortium
Project:
AMP