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Citing CMDGA
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Assay category
1
3D chromatin structure
1
DNA binding
Assay
1
ChIP-seq
1
Hi-C
Project
2
AMP
RFA
2
AMP
Experiment status
2
released
Organism
2
Homo sapiens
Target of assay
1
transcription factor
Biosample type
2
cell line
Organ
2
liver
Life stage
2
child
Available data
367
fastq
bam
332
bigWig
308
bed narrowPeak
293
bigBed narrowPeak
58
bed broadPeak
58
bigBed broadPeak
15
tsv
12
tagAlign
3
tar
1
bed bed3
1
bed bed3+
1
bed bedMethyl
1
bedpe bed3+
1
bigBed bedMethyl
1
hic
1
vcf
Platform
1
Illumina Genome Analyzer IIx
1
Illumina HiSeq 2000
Run type
1
paired-ended
1
single-ended
Read length (nt)
1
36
1
50
Library made from
2
DNA
Date released
1
December, 2018
1
November, 2017
Lab
2
AMP-T2D consortium
Replication type
2
isogenic
files.file_type!
bam
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Experiment
TSTSR542TGF
released
Hi-C
of HepG2
Homo sapiens
HepG2
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR641802
released
ChIP-seq
of HepG2
Homo sapiens
HepG2
Target:
TBL1XR1
Lab:
AMP-T2D consortium
Project:
AMP