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Assay
1818
ChIP-seq
1469
total RNA-seq
515
ATAC-seq
363
single cell RNA-seq
83
snATAC-seq
75
WGBS
54
pCHi-C
29
Hi-C
21
RRBS
18
small RNA-seq
10
MeRIP-seq
8
DNase-seq
5
FAIRE-seq
5
GRO-seq
5
STARR-seq
3
CRISPR genome editing followed by DNA sequencing
3
RNA microarray
3
snDrop-seq
2
Capture-C
2
HiChIP
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
DNAme array
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Project
4
AMP
RFA
4
AMP
Experiment status
4
released
Organism
2
Homo sapiens
Biosample type
3
tissue
1
cell line
Organ
bone element
2
epithelium
2
kidney
1
adipose tissue
1
connective tissue
1
pancreas
Life stage
2
unknown
Available data
2
tsv
Library made from
2
RNA
Date released
2
December, 2019
1
August, 2021
1
February, 2023
Lab
4
AMP-T2D consortium
Replication type
4
unreplicated
Audit category:
2
audit script error
files.file_type!
bed bed3+
organ_slims!
bone element
Showing 4 of 4 results
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Experiment
DSR465BDK
released
CRISPR genome editing followed by sgRNA sequencing
of EndoC_BH1
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR795DZU
released
RNA microarray
of subcutaneous adipose tissue
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR479AEW
released
Audit error
1
RNA microarray
of kidney interstitium
Homo sapiens
kidney interstitium
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR187TER
released
Audit error
1
RNA microarray
of renal glomerulus
Homo sapiens
renal glomerulus
Lab:
AMP-T2D consortium
Project:
AMP