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Assay
1450
ChIP-seq
1232
total RNA-seq
403
ATAC-seq
359
single cell RNA-seq
85
RNA microarray
80
snATAC-seq
75
WGBS
24
Hi-C
18
small RNA-seq
10
RRBS
6
pCHi-C
4
DNase-seq
4
FAIRE-seq
4
MeRIP-seq
2
snDrop-seq
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
DNAme array
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
Project
6
AMP
RFA
6
AMP
Experiment status
6
released
Genome assembly (visualization)
2
hg19
Organism
6
Homo sapiens
Biosample type
4
tissue
2
in vitro differentiated cells
Organ
4
eye
Life stage
unknown
6
adult
Available data
bed bed3+
2
bedpe bed3+
2
ibed
1
bam
Library made from
6
DNA
Date released
4
October, 2019
2
March, 2020
Lab
6
AMP-T2D consortium
Replication type
4
unreplicated
2
isogenic
Audit category:
2
inconsistent ontology term
files.file_type!
bed bed3+
replicates.library.biosample.life_stage!
unknown
Showing 6 of 6 results
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Experiment
DSR535XNG
released
Audit error
1
pCHi-C
of lymphocyte of B lineage (iPSC)
Homo sapiens
lymphocyte of B lineage (iPSC)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR382TEU
released
Audit error
1
pCHi-C
of cardiomyocytes (cardiac muscle cell)
Homo sapiens
cardiomyocytes (cardiac muscle cell)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR896KME
released
pCHi-C
of islet of Langerhans
Homo sapiens
islet of Langerhans female adult (32 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR691JIZ
released
pCHi-C
of islet of Langerhans
Homo sapiens
islet of Langerhans male adult (53 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR563ZWW
released
pCHi-C
of islet of Langerhans
Homo sapiens
islet of Langerhans female adult (67 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR072PQG
released
pCHi-C
of islet of Langerhans
Homo sapiens
islet of Langerhans male adult (40 years)
Lab:
AMP-T2D consortium
Project:
AMP