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Assay category
7
DNA accessibility
Assay
1690
ChIP-seq
1334
total RNA-seq
467
ATAC-seq
222
single cell RNA-seq
87
RNA microarray
38
pCHi-C
28
WGBS
25
Hi-C
21
RRBS
18
small RNA-seq
10
MeRIP-seq
8
DNase-seq
7
snATAC-seq
5
FAIRE-seq
5
GRO-seq
5
STARR-seq
3
snDrop-seq
2
Capture-C
1
CRISPR genome editing followed by sgRNA sequencing
1
DNAme array
1
MPRA
1
whole genome sequencing assay
Project
48
HPAP
18
T1D
10
LungMap
7
AMP
RFA
6
AMP2
1
AMP
Experiment status
7
released
Organism
7
Homo sapiens
Biosample type
7
tissue
Organ
6
kidney
1
pancreas
Life stage
6
adult
1
unknown
Available data
bed bed3+
1
txt
Library made from
7
DNA
Date released
6
August, 2021
1
August, 2022
Lab
6
Katalin Susztak, Upenn
1
AMP-T2D consortium
Replication type
4
isogenic
3
unreplicated
Audit category:
1
audit script error
files.file_type!
bed bed3+
Showing 7 of 7 results
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Experiment
DSR260JLJ
released
Audit error
1
snATAC-seq
of islet of Langerhans
Homo sapiens
islet of Langerhans
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR573GUG
released
snATAC-seq
of kidney
Homo sapiens
kidney female adult (65 years)
Lab:
Katalin Susztak, Upenn
Project:
AMP
Experiment
DSR988IHH
released
snATAC-seq
of kidney
Homo sapiens
kidney male adult (74 years)
Lab:
Katalin Susztak, Upenn
Project:
AMP
Experiment
DSR992XSL
released
snATAC-seq
of kidney
Homo sapiens
kidney female adult (85 years)
Lab:
Katalin Susztak, Upenn
Project:
AMP
Experiment
DSR056RSW
released
snATAC-seq
of kidney
Homo sapiens
kidney male adult (52 years)
Lab:
Katalin Susztak, Upenn
Project:
AMP
Experiment
DSR060OQF
released
snATAC-seq
of kidney
Homo sapiens
kidney female adult (85 years)
Lab:
Katalin Susztak, Upenn
Project:
AMP
Experiment
DSR223KQW
released
snATAC-seq
of kidney
Homo sapiens
kidney female adult (70 years)
Lab:
Katalin Susztak, Upenn
Project:
AMP