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Citing CMDGA
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Assay category
7
DNA methylation
Assay
409
total RNA-seq
257
ChIP-seq
153
ATAC-seq
75
single cell RNA-seq
52
WGBS
41
DNase-seq
15
Hi-C
12
snATAC-seq
10
MeRIP-seq
7
RRBS
4
small RNA-seq
2
Capture-C
2
FAIRE-seq
2
pCHi-C
1
CRISPR genome editing followed by sgRNA sequencing
Project
7
AMP
RFA
7
AMP
Experiment status
7
released
Genome assembly (visualization)
5
hg19
Organism
7
Homo sapiens
Biosample type
6
tissue
1
primary cell
Organ
6
epithelium
5
musculature of body
4
kidney
2
brain
2
heart
2
liver
2
pancreas
1
connective tissue
1
eye
1
pericardium
1
vasculature
Life stage
5
adult
2
unknown
Available data
5
bed bedMethyl
5
bigBed bedMethyl
2
fastq
Platform
2
Illumina Genome Analyzer IIx
Run type
2
single-ended
Read length (nt)
2
36
Library made from
7
DNA
Date released
4
August, 2017
3
July, 2019
Lab
7
AMP-T2D consortium
Replication type
5
isogenic
2
unreplicated
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Showing 7 of 7 results
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Experiment
DSR488BRN
released
RRBS
of skeletal muscle cell
Homo sapiens
skeletal muscle cell
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR210DNG
released
RRBS
of islet of Langerhans
Homo sapiens
islet of Langerhans male (53 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR015YSF
released
RRBS
of pancreas
Homo sapiens
pancreas male adult (71 year)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR698044
released
RRBS
of skeletal muscle tissue
Homo sapiens
skeletal muscle tissue female adult (72 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR637767
released
RRBS
of skeletal muscle tissue
Homo sapiens
skeletal muscle tissue male adult (54 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR745497
released
RRBS
of skeletal muscle tissue
Homo sapiens
skeletal muscle tissue male adult (71 year)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR621123
released
RRBS
of skeletal muscle tissue
Homo sapiens
skeletal muscle tissue female adult (83 years)
Lab:
AMP-T2D consortium
Project:
AMP