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Citing CMDGA
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Assay category
1
DNA binding
1
DNA methylation
Assay
1
ChIP-seq
1
DNase-seq
1
WGBS
Project
2
AMP
RFA
2
AMP
Experiment status
2
released
Genome assembly (visualization)
1
GRCh38
1
hg19
Organism
2
Homo sapiens
Target of assay
1
histone
1
histone modification
1
narrow histone mark
Biosample type
2
tissue
Organ
2
liver
Life stage
1
adult
1
child
Available data
2
fastq
1
bam
1
bed narrowPeak
1
bigBed narrowPeak
1
bigWig
Platform
50
Illumina HiSeq 2000
7
MiSeq
3
Illumina Genome Analyzer IIx
2
Applied Biosystems SOLiD System 3 Plus
2
Illumina Genome Analyzer
2
Illumina Genome Analyzer II
2
Illumina HiSeq 2500
Run type
2
single-ended
Read length (nt)
1
36
1
100
Mapped read length (nt)
1
36
Library made from
2
DNA
Date released
2
August, 2017
Lab
2
AMP-T2D consortium
Replication type
2
unreplicated
Audit category:
1
inconsistent control read length
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bed bedMethyl
Showing 2 of 2 results
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Experiment
TSTSR621783
released
WGBS
of liver
Homo sapiens
liver male child (3 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR999552
released
Audit warning
1
ChIP-seq
of liver
Homo sapiens
liver male adult (32 years)
Target:
H3K4me3
Lab:
AMP-T2D consortium
Project:
AMP