Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Assay category
3
DNA binding
Assay
199
total RNA-seq
42
WGBS
3
ChIP-seq
Project
3
AMP
RFA
3
AMP
Experiment status
3
released
Genome assembly (visualization)
3
GRCh38
3
hg19
Organism
3
Homo sapiens
Target of assay
3
transcription factor
Biosample type
3
tissue
Organ
3
adipose tissue
3
connective tissue
Life stage
3
unknown
Available data
10
bam
10
bigWig
10
fastq
bed narrowPeak
7
bigBed narrowPeak
Platform
3
Illumina HiSeq 2000
Run type
3
single-ended
Read length (nt)
60
36
45
50
33
100
23
76
21
51
17
40
7
49
3
27
3
61
3
101
3
200
2
25
2
32
2
35
2
67
1
33
1
37
1
38
Library made from
3
DNA
Date released
3
August, 2017
Lab
3
AMP-T2D consortium
Replication type
3
unreplicated
Audit category:
3
missing controlled_by
files.file_type!
bed narrowPeak
Showing 3 of 3 results
table-tab-icon
matrix-icon
Download
Experiment
TSTSR143230
released
Audit not_compliant
1
ChIP-seq
of white adipose tissue
Homo sapiens
white adipose tissue
Target:
PPARG
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR844065
released
Audit not_compliant
1
ChIP-seq
of white adipose tissue
Homo sapiens
white adipose tissue
Target:
PPARG
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR326998
released
Audit not_compliant
1
ChIP-seq
of white adipose tissue
Homo sapiens
white adipose tissue
Target:
PPARG
Lab:
AMP-T2D consortium
Project:
AMP