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Citing CMDGA
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Assay category
3
DNA methylation
2
DNA accessibility
1
DNA binding
1
Transcription
Assay
3
WGBS
2
ATAC-seq
1
ChIP-seq
1
total RNA-seq
Project
7
AMP
RFA
7
AMP
Experiment status
7
released
Genome assembly (visualization)
3
GRCh38
3
hg19
Organism
7
Homo sapiens
Target of assay
1
control
Biosample type
7
tissue
Organ
7
adipose tissue
7
connective tissue
Life stage
4
adult
2
unknown
1
child
Available data
386
bigWig
385
bam
tsv
5
fastq
2
bed bedMethyl
bed narrowPeak
2
bigBed bedMethyl
2
bigBed narrowPeak
Platform
3
Illumina HiSeq 2500
1
Illumina HiSeq 2000
Run type
4
single-ended
Read length (nt)
3
100
1
36
Mapped read length (nt)
1
36
Library made from
6
DNA
1
RNA
Date released
4
August, 2017
1
January, 2018
1
May, 2023
1
October, 2019
Lab
7
AMP-T2D consortium
Replication type
6
unreplicated
1
anisogenic
files.file_type!
bed narrowPeak
tsv
Showing 7 of 7 results
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Experiment
DSR720HHB
released
total RNA-seq
of adipose tissue
Homo sapiens
adipose tissue female adult (51 year)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR543YBS
released
ATAC-seq
of adipose tissue
Homo sapiens
adipose tissue
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR511851
released
ATAC-seq
of adipose tissue
Homo sapiens
adipose tissue
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR162898
released
WGBS
of adipose tissue
Homo sapiens
adipose tissue female adult (30 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR031119
released
WGBS
of adipose tissue
Homo sapiens
adipose tissue male child (3 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR430639
released
WGBS
of adipose tissue
Homo sapiens
adipose tissue male adult (34 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR560677
released
ChIP-seq
of adipose tissue
Homo sapiens
adipose tissue male adult (34 years)
Target:
Control
Lab:
AMP-T2D consortium
Project:
AMP