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Citing CMDGA
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Assay category
1
3D chromatin structure
1
DNA accessibility
Assay
167
total RNA-seq
95
ChIP-seq
20
ATAC-seq
3
WGBS
1
DNase-seq
1
Hi-C
1
RRBS
1
pCHi-C
1
single cell RNA-seq
1
small RNA-seq
Project
2
AMP
RFA
2
AMP
Experiment status
2
released
Genome assembly (visualization)
2
hg19
1
GRCh38
Organism
2
Homo sapiens
Biosample type
2
tissue
Organ
2
liver
Life stage
1
adult
1
embryonic
Available data
1
bam
1
bed bed3+
1
bed broadPeak
1
bed narrowPeak
1
bedpe bed3+
1
bigBed broadPeak
1
bigBed narrowPeak
1
bigWig
1
fastq
1
hic
Platform
Illumina HiSeq 2000
1
Illumina HiSeq 2500
1
Illumina HiSeq 4000
Run type
1
paired-ended
Read length (nt)
1
36
Library made from
2
DNA
Date released
1
March, 2020
1
November, 2018
Lab
2
AMP-T2D consortium
Replication type
2
unreplicated
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bedpe
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Illumina HiSeq 2000
Showing 2 of 2 results
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Experiment
DSR477FKL
released
Hi-C
of liver
Homo sapiens
liver male adult (32 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR869ANN
released
DNase-seq
of liver
Homo sapiens
liver female embryo (113 days)
Lab:
AMP-T2D consortium
Project:
AMP