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Schema
Citing CMDGA
Clear Filters
Assay category
2
3D chromatin structure
Assay
397
total RNA-seq
218
ChIP-seq
152
ATAC-seq
80
single cell RNA-seq
51
WGBS
11
snATAC-seq
10
MeRIP-seq
8
DNase-seq
2
Capture-C
2
FAIRE-seq
2
Hi-C
2
RRBS
2
small RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
pCHi-C
0
snDrop-seq
Project
2
AMP
RFA
1
AMP
1
AMP2
Experiment status
2
released
Genome assembly (visualization)
2
hg19
1
GRCh38
Organism
2
Homo sapiens
Biosample type
1
cell line
1
tissue
Organ
4
kidney
4
limb
4
musculature of body
3
blood vessel
3
brain
3
epithelium
3
vasculature
2
liver
2
pancreas
1
connective tissue
1
vein
Life stage
2
adult
Available data
bedpe bed3+
7
hic
3
cool
1
bed bed3+
1
bedpe
1
bigWig
1
hdf5
Library made from
2
DNA
Date released
1
March, 2019
1
October, 2019
Lab
1
AMP-T2D consortium
1
Bing Ren, UCSD
Replication type
1
anisogenic
1
isogenic
Audit category:
1
inconsistent assembly
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bedpe bed3+
Showing 2 of 2 results
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Experiment
DSR617LKP
released
Audit warning
1
Hi-C
of Panc1
Homo sapiens
Panc1
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR043623
released
Hi-C
of islet of Langerhans
Homo sapiens
islet of Langerhans female adult (56 years) and female adult (59 years) and male adult (53 years)
Lab:
Bing Ren, UCSD
Project:
AMP