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Assay
1733
ChIP-seq
1403
total RNA-seq
489
ATAC-seq
354
single cell RNA-seq
84
snATAC-seq
75
WGBS
48
pCHi-C
29
Hi-C
19
RRBS
18
small RNA-seq
6
DNase-seq
5
FAIRE-seq
5
GRO-seq
4
MeRIP-seq
4
STARR-seq
3
CRISPR genome editing followed by DNA sequencing
3
RNA microarray
3
snDrop-seq
2
Capture-C
2
HiChIP
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
DNAme array
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Project
3
AMP
RFA
2
AMP2
1
AMP
Experiment status
3
released
Genome assembly (visualization)
2
hg19
Organism
2
Homo sapiens
Biosample type
2
in vitro differentiated cells
1
cell line
Organ
2
connective tissue
1
epithelium
1
pancreas
Life stage
2
unknown
Available data
2
bed bed3+
Library made from
2
DNA
Date released
2
August, 2021
1
February, 2023
Lab
2
Struan F.A. Grant, CHOP
1
AMP-T2D consortium
Replication type
2
anisogenic
1
unreplicated
Audit category:
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files.file_type!
bigBed broadPeak
audit.ERROR.category!
inconsistent ontology term
Showing 3 of 3 results
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Experiment
DSR465BDK
released
CRISPR genome editing followed by sgRNA sequencing
of EndoC_BH1
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR976OUK
released
Capture-C
of osteoblast
Homo sapiens
osteoblast
Lab:
Struan F.A. Grant, CHOP
Project:
AMP
Experiment
DSR621POD
released
Capture-C
of adipocyte
Homo sapiens
adipocyte
Lab:
Struan F.A. Grant, CHOP
Project:
AMP