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Assay
1733
ChIP-seq
1403
total RNA-seq
489
ATAC-seq
354
single cell RNA-seq
84
snATAC-seq
75
WGBS
48
pCHi-C
29
Hi-C
19
RRBS
18
small RNA-seq
6
DNase-seq
5
FAIRE-seq
5
GRO-seq
4
MeRIP-seq
4
STARR-seq
3
CRISPR genome editing followed by DNA sequencing
3
RNA microarray
3
snDrop-seq
2
Capture-C
2
HiChIP
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
DNAme array
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Project
5
AMP
RFA
3
AMP
2
AMP2
Experiment status
5
released
Genome assembly (visualization)
2
hg19
Organism
4
Homo sapiens
Biosample type
3
tissue
2
in vitro differentiated cells
Organ
3
connective tissue
2
kidney
1
adipose tissue
1
epithelium
Life stage
4
unknown
Available data
2
bed bed3+
2
tsv
Library made from
2
DNA
2
RNA
Date released
3
August, 2021
2
December, 2019
Lab
3
AMP-T2D consortium
2
Struan F.A. Grant, CHOP
Replication type
3
unreplicated
2
anisogenic
Audit category:
inconsistent ontology term
2
audit script error
files.file_type!
bigBed broadPeak
audit.ERROR.category!
inconsistent ontology term
Showing 5 of 5 results
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Experiment
DSR976OUK
released
Capture-C
of osteoblast
Homo sapiens
osteoblast
Lab:
Struan F.A. Grant, CHOP
Project:
AMP
Experiment
DSR621POD
released
Capture-C
of adipocyte
Homo sapiens
adipocyte
Lab:
Struan F.A. Grant, CHOP
Project:
AMP
Experiment
DSR795DZU
released
RNA microarray
of subcutaneous adipose tissue
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR479AEW
released
Audit error
1
RNA microarray
of kidney interstitium
Homo sapiens
kidney interstitium
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR187TER
released
Audit error
1
RNA microarray
of renal glomerulus
Homo sapiens
renal glomerulus
Lab:
AMP-T2D consortium
Project:
AMP