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Assay category
5
DNA accessibility
Assay
13
ChIP-seq
7
total RNA-seq
5
ATAC-seq
4
WGBS
2
single cell RNA-seq
Project
3
AMP
2
HPAP
RFA
3
AMP
2
HPAP
Experiment status
5
released
Genome assembly (visualization)
3
GRCh38
3
hg19
Organism
5
Homo sapiens
Biosample type
5
primary cell
Organ
5
epithelium
5
pancreas
Life stage
adult
3
child
2
unknown
Available data
3
bam
3
bed narrowPeak
3
bigBed narrowPeak
3
bigWig
3
fastq
2
zippedFastqFolder
Platform
2
HiSeq HighOutput V4
2
Illumina NextSeq 500
1
Illumina HiSeq 2000
Run type
5
paired-ended
Read length (nt)
4
50
2
41
1
102
Library made from
5
DNA
Date released
2
May, 2022
2
September, 2017
1
September, 2018
Lab
3
AMP-T2D consortium
2
Klaus Kaestner, Upenn
Replication type
5
unreplicated
files.file_type!
ibed
month_released!
August, 2020
replicates.library.biosample.life_stage!
adult
Showing 5 of 5 results
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Experiment
DSR826QVG
released
ATAC-seq
of pancreatic alpha cell
Homo sapiens
pancreatic alpha cell male child (13 years)
Lab:
Klaus Kaestner, Upenn
Project:
HPAP
Experiment
DSR529JQL
released
ATAC-seq
of pancreatic alpha cell
Homo sapiens
pancreatic alpha cell male child (3 years)
Lab:
Klaus Kaestner, Upenn
Project:
HPAP
Experiment
TSTSR351IAS
released
ATAC-seq
of pancreatic alpha cell
Homo sapiens
pancreatic alpha cell male child (17 months)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR794793
released
ATAC-seq
of pancreatic alpha cell
Homo sapiens
pancreatic alpha cell
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR855058
released
ATAC-seq
of pancreatic alpha cell
Homo sapiens
pancreatic alpha cell
Lab:
AMP-T2D consortium
Project:
AMP