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Citing CMDGA
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Assay category
2
DNA binding
1
Transcription
Assay
2
ChIP-seq
1
total RNA-seq
Project
3
AMP
RFA
3
AMP
Experiment status
3
released
Genome assembly (visualization)
2
GRCh38
2
hg19
Organism
3
Homo sapiens
Target of assay
2
histone
2
histone modification
1
broad histone mark
1
control
narrow histone mark
Biosample type
3
in vitro differentiated cells
Life stage
3
embryonic
Available data
3
bam
3
fastq
2
bigWig
1
bed narrowPeak
1
tsv
Platform
3
Illumina Genome Analyzer IIx
2
Illumina HiSeq 2000
Run type
3
single-ended
Read length (nt)
2
36
1
100
1
101
Library insert size (nt)
1
225-275
Library made from
2
DNA
1
RNA
Date released
3
February, 2018
Lab
3
AMP-T2D consortium
Replication type
3
unreplicated
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ibed
target.investigated_as!
narrow histone mark
Showing 3 of 3 results
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Experiment
TSTSR358715
released
total RNA-seq
of embryonic stem cell
Homo sapiens
embryonic stem cell
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR086684
released
ChIP-seq
of embryonic stem cell
Homo sapiens
embryonic stem cell
Target:
H3K27me3
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR909874
released
ChIP-seq
of embryonic stem cell
Homo sapiens
embryonic stem cell
Target:
Control
Lab:
AMP-T2D consortium
Project:
AMP