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Assay category
7
Transcription
Assay
7
total RNA-seq
4
WGBS
3
ATAC-seq
2
single cell RNA-seq
Project
5
AMP
2
HPAP
RFA
5
AMP
2
HPAP
Experiment status
7
released
Genome assembly (visualization)
5
GRCh38
5
hg19
Organism
7
Homo sapiens
Biosample type
7
primary cell
Organ
7
epithelium
7
pancreas
Life stage
45
adult
7
child
Available data
7
fastq
5
bam
5
bigWig
5
tsv
Platform
5
Illumina HiSeq 2000
1
Illumina HiSeq 4000
1
Illumina NovaSeq 6000
Run type
5
paired-ended
2
single-ended
Read length (nt)
6
101
1
100
Library made from
7
RNA
Date released
5
September, 2018
1
February, 2023
1
September, 2020
Lab
5
AMP-T2D consortium
2
Klaus Kaestner, Upenn
Replication type
7
unreplicated
files.file_type!
tagAlign bed3+
target.investigated_as!
histone modification
Showing 7 of 7 results
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Experiment
DSR343WWL
released
total RNA-seq
of pancreatic alpha cell
Homo sapiens
pancreatic alpha cell male child (13 years)
Lab:
Klaus Kaestner, Upenn
Project:
HPAP
Experiment
DSR412NQK
released
total RNA-seq
of pancreatic alpha cell
Homo sapiens
pancreatic alpha cell male child (3 years)
Lab:
Klaus Kaestner, Upenn
Project:
HPAP
Experiment
TSTSR370ILE
released
total RNA-seq
of pancreatic alpha cell
Homo sapiens
pancreatic alpha cell child (6 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR317FOP
released
total RNA-seq
of pancreatic alpha cell
Homo sapiens
pancreatic alpha cell child (5 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR006JPL
released
total RNA-seq
of pancreatic alpha cell
Homo sapiens
pancreatic alpha cell child (5 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR583WPO
released
total RNA-seq
of pancreatic alpha cell
Homo sapiens
pancreatic alpha cell child (17 months)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR978LXD
released
total RNA-seq
of pancreatic alpha cell
Homo sapiens
pancreatic alpha cell child (8 months)
Lab:
AMP-T2D consortium
Project:
AMP