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Assay
84
RNA microarray
59
ChIP-seq
35
ATAC-seq
6
MeRIP-seq
5
Hi-C
4
DNase-seq
3
pCHi-C
2
Capture-C
2
RRBS
2
total RNA-seq
1
STARR-seq
Project
2
AMP
1
T1D
RFA
2
AMP
1
T1D
Experiment status
3
released
Genome assembly (visualization)
2
hg19
Organism
3
Homo sapiens
Biosample type
2
in vitro differentiated cells
1
primary cell
Life stage
2
adult
1
unknown
Available data
tsv
2
bedpe bed3+
2
ibed
Library made from
3
DNA
Date released
2
March, 2020
1
May, 2021
Lab
2
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Replication type
3
isogenic
Audit category:
3
inconsistent ontology term
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Experiment
DSR409IRC
released
Audit error
1
pCHi-C
of naive B cel
Homo sapiens
naive B cel and naive B cell
Lab:
Kyle Gaulton, UCSD
Project:
T1D
Experiment
DSR535XNG
released
Audit error
1
pCHi-C
of lymphocyte of B lineage (iPSC)
Homo sapiens
lymphocyte of B lineage (iPSC)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR382TEU
released
Audit error
1
pCHi-C
of cardiomyocytes (cardiac muscle cell)
Homo sapiens
cardiomyocytes (cardiac muscle cell)
Lab:
AMP-T2D consortium
Project:
AMP