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Citing CMDGA
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Assay category
3
DNA binding
3
Transcription
Assay
3
ChIP-seq
3
total RNA-seq
Project
6
AMP
RFA
6
AMP
Experiment status
6
released
Genome assembly (visualization)
5
GRCh38
5
hg19
Organism
6
Homo sapiens
Target of assay
2
histone
2
histone modification
1
broad histone mark
1
control
1
narrow histone mark
Biosample type
5
in vitro differentiated cells
1
primary cell
Life stage
unknown
6
embryonic
Available data
6
bam
5
bigWig
5
fastq
3
tsv
2
bed narrowPeak
Platform
4
Illumina Genome Analyzer IIx
2
Illumina HiSeq 2000
Run type
5
single-ended
Read length (nt)
3
36
2
100
1
101
Library insert size (nt)
2
225-275
Library made from
3
DNA
3
RNA
Date released
5
February, 2018
1
May, 2021
Lab
6
AMP-T2D consortium
Replication type
5
unreplicated
1
anisogenic
files.file_type!
txt
replicates.library.biosample.life_stage!
unknown
Showing 6 of 6 results
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Experiment
DSR213JXG
released
total RNA-seq
of embryonic stem cell
Homo sapiens
embryonic stem cell embryo (0 days)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR787281
released
total RNA-seq
of embryonic stem cell
Homo sapiens
embryonic stem cell
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR358715
released
total RNA-seq
of embryonic stem cell
Homo sapiens
embryonic stem cell
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR403069
released
ChIP-seq
of embryonic stem cell
Homo sapiens
embryonic stem cell
Target:
H3K4me3
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR086684
released
ChIP-seq
of embryonic stem cell
Homo sapiens
embryonic stem cell
Target:
H3K27me3
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR909874
released
ChIP-seq
of embryonic stem cell
Homo sapiens
embryonic stem cell
Target:
Control
Lab:
AMP-T2D consortium
Project:
AMP