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Schema
Citing CMDGA
Clear Filters
Assay category
3
3D chromatin structure
2
DNA methylation
Assay
134
ChIP-seq
93
single cell RNA-seq
72
total RNA-seq
47
ATAC-seq
30
DNase-seq
8
WGBS
3
Hi-C
3
pCHi-C
2
RRBS
1
small RNA-seq
Project
5
AMP
RFA
5
AMP
Experiment status
5
released
Genome assembly (visualization)
5
hg19
Organism
5
Homo sapiens
Biosample type
4
tissue
1
primary cell
Organ
14
epithelium
11
musculature of body
11
pancreas
6
liver
6
vasculature
5
blood vessel
5
brain
5
heart
5
kidney
4
limb
2
connective tissue
2
vein
1
eye
1
pericardium
Life stage
3
adult
1
embryonic
1
unknown
Available data
3
bedpe bed3+
3
hic
2
bed bedMethyl
2
bigBed bedMethyl
Library made from
5
DNA
Date released
2
July, 2019
2
March, 2020
1
October, 2019
Lab
5
AMP-T2D consortium
Replication type
2
isogenic
2
unreplicated
1
anisogenic
Audit category:
1
inconsistent ontology term
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Experiment
DSR082IVJ
released
Hi-C
of heart right ventricle
Homo sapiens
heart right ventricle male adult (34 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR900RAK
released
Hi-C
of heart left ventricle
Homo sapiens
heart left ventricle male adult (34 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR786VPZ
released
Hi-C
of heart
Homo sapiens
heart embryo (57 days) and embryo (67 days)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR253RYM
released
Audit error
1
RRBS
of cardiac fibroblast
Homo sapiens
cardiac fibroblast
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR478ZAU
released
RRBS
of heart left ventricle
Homo sapiens
heart left ventricle male adult (26 years)
Lab:
AMP-T2D consortium
Project:
AMP