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Citing CMDGA
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Assay category
4
DNA binding
Assay
4
ChIP-seq
Project
4
AMP
RFA
4
AMP
Experiment status
4
released
Genome assembly (visualization)
4
GRCh38
4
hg19
Organism
4
Homo sapiens
Target of assay
6
transcription factor
4
histone
4
histone modification
3
narrow histone mark
1
RNA binding protein
1
broad histone mark
Biosample type
4
tissue
Organ
4
pancreas
Life stage
4
unknown
Available data
4
bam
4
bed bed3+
4
bigWig
4
fastq
1
bed narrowPeak
Platform
2
Illumina Genome Analyzer IIx
1
Illumina Genome Analyzer
1
Illumina HiSeq 2000
Run type
4
single-ended
Read length (nt)
3
51
2
36
1
49
Library made from
4
DNA
Date released
4
August, 2017
Lab
4
AMP-T2D consortium
Replication type
4
anisogenic
Audit category:
4
missing controlled_by
Showing 4 of 4 results
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Experiment
TSTSR033518
released
Audit not_compliant
1
ChIP-seq
of islet of Langerhans
Homo sapiens
islet of Langerhans female (37 years) and female (41 year) and female (58 years) and male (36 years)
Target:
H3K4me3
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR760577
released
Audit not_compliant
1
ChIP-seq
of islet of Langerhans
Homo sapiens
islet of Langerhans male (38 years) and male (62 years) and male (63 years)
Target:
H2AFZ
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR352275
released
Audit not_compliant
1
ChIP-seq
of islet of Langerhans
Homo sapiens
islet of Langerhans male (38 years) and male (59 years) and male (70 years)
Target:
H3K4me1
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR903829
released
Audit not_compliant
1
ChIP-seq
of islet of Langerhans
Homo sapiens
islet of Langerhans female (38 years) and male (38 years)
Target:
H3K27ac
Lab:
AMP-T2D consortium
Project:
AMP