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Schema
Citing CMDGA
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Assay category
5
3D chromatin structure
Assay
204
DNase-seq
53
ChIP-seq
5
Hi-C
4
ATAC-seq
2
Capture-C
2
pCHi-C
2
total RNA-seq
1
snATAC-seq
Project
7
AMP
RFA
7
AMP
Experiment status
7
released
Genome assembly (visualization)
7
hg19
1
GRCh38
Organism
7
Homo sapiens
Biosample type
5
primary cell
2
cell line
Organ
3
brain
2
blood vessel
2
connective tissue
2
epithelium
2
liver
2
vasculature
1
pancreas
Life stage
4
unknown
3
adult
Available data
31
tsv
23
bedpe bed3+
23
hic
7
bed bed3+
5
bigWig
5
hdf5
3
cool
2
fastq
2
ibed
1
bam
1
bedpe
Library made from
7
DNA
Date released
4
July, 2019
2
February, 2021
1
October, 2019
Lab
7
AMP-T2D consortium
Replication type
6
isogenic
1
anisogenic
Audit category:
1
inconsistent assembly
Showing 7 of 7 results
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Experiment
DSR583PNT
released
pCHi-C
of HepG2
Homo sapiens
HepG2
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR241RZY
released
pCHi-C
of osteoblast
Homo sapiens
osteoblast adult
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR617LKP
released
Audit warning
1
Hi-C
of Panc1
Homo sapiens
Panc1
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR770TGA
released
Hi-C
of brain pericyte
Homo sapiens
brain pericyte
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR270TQF
released
Hi-C
of astrocyte of the cerebellum
Homo sapiens
astrocyte of the cerebellum
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR933OWU
released
Hi-C
of endothelial cell of hepatic sinusoid
Homo sapiens
endothelial cell of hepatic sinusoid
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR240JNB
released
Hi-C
of brain microvascular endothelial cell
Homo sapiens
brain microvascular endothelial cell
Lab:
AMP-T2D consortium
Project:
AMP