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Citing CMDGA
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Assay category
4
DNA binding
Assay
4
ChIP-seq
1
GRO-seq
Project
5
AMP
RFA
5
AMP
Experiment status
5
released
Genome assembly (visualization)
4
GRCh38
4
hg19
1
hg18
Organism
5
Homo sapiens
Target of assay
2
histone
2
histone modification
2
transcription factor
broad histone mark
1
control
1
narrow histone mark
Biosample type
5
in vitro differentiated cells
Life stage
5
unknown
Available data
5
fastq
4
bam
4
bigWig
3
bed narrowPeak
2
bed bed3+
Platform
5
Illumina HiSeq 2500
Run type
5
single-ended
Read length (nt)
3
36
2
50
Library made from
5
DNA
Date released
4
December, 2017
1
January, 2018
Lab
5
AMP-T2D consortium
Replication type
3
unreplicated
2
isogenic
Audit category:
1
inconsistent control read length
target.investigated_as!
broad histone mark
Showing 5 of 5 results
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Experiment
TSTSR520547
released
GRO-seq
of Posterior foregut
Homo sapiens
Posterior foregut
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR186936
released
ChIP-seq
of Posterior foregut
Homo sapiens
Posterior foregut
Target:
H3K27ac
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR376587
released
Audit warning
1
ChIP-seq
of Posterior foregut
Homo sapiens
Posterior foregut
Target:
FOXA2
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR136347
released
ChIP-seq
of Posterior foregut
Homo sapiens
Posterior foregut
Target:
FOXA1
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR028559
released
ChIP-seq
of Posterior foregut
Homo sapiens
Posterior foregut
Target:
Control
Lab:
AMP-T2D consortium
Project:
AMP