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Schema
Citing CMDGA
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Assay category
4
DNA binding
Assay
9
DNase-seq
4
ChIP-seq
Project
4
AMP
RFA
4
AMP
Experiment status
4
released
Genome assembly (visualization)
4
hg19
2
GRCh38
Organism
4
Homo sapiens
Target of assay
3
histone
3
histone modification
2
broad histone mark
1
RNA binding protein
1
narrow histone mark
1
transcription factor
Biosample type
4
primary cell
Organ
58
liver
15
brain
13
musculature of body
12
pancreas
6
epithelium
6
vasculature
4
blood vessel
2
vein
1
adipose tissue
1
connective tissue
Life stage
2
newborn
2
unknown
Available data
99
bam
76
bigWig
73
bed narrowPeak
69
bigBed narrowPeak
6
tagAlign
4
bed broadPeak
4
bigBed broadPeak
3
fastq
Platform
1
Illumina Genome Analyzer
1
Illumina Genome Analyzer II
Run type
2
single-ended
Read length (nt)
2
36
Library made from
4
DNA
Date released
2
November, 2017
2
October, 2019
Lab
4
AMP-T2D consortium
Replication type
4
isogenic
Showing 4 of 4 results
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Experiment
DSR977JZB
released
ChIP-seq
of endothelial cell of umbilical vein
Homo sapiens
endothelial cell of umbilical vein male newborn
Target:
H3K4me1
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR478THK
released
ChIP-seq
of endothelial cell of umbilical vein
Homo sapiens
endothelial cell of umbilical vein male newborn
Target:
H3K36me3
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR007495
released
ChIP-seq
of brain microvascular endothelial cell
Homo sapiens
brain microvascular endothelial cell
Target:
H3K4me3
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR492951
released
ChIP-seq
of brain microvascular endothelial cell
Homo sapiens
brain microvascular endothelial cell
Target:
CTCF
Lab:
AMP-T2D consortium
Project:
AMP