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Schema
Citing CMDGA
Clear Filters
Assay category
3
DNA binding
2
DNA accessibility
Assay
3
ChIP-seq
2
DNase-seq
Project
5
AMP
RFA
5
AMP
Experiment status
5
released
Genome assembly (visualization)
5
GRCh38
5
hg19
Organism
5
Homo sapiens
Target of assay
3
histone
3
histone modification
2
broad histone mark
1
narrow histone mark
Biosample type
5
tissue
Organ
5
brain
Life stage
5
embryonic
Available data
16
bam
14
bigWig
14
tagAlign
13
bed narrowPeak
11
fastq
8
bigBed narrowPeak
5
bed broadPeak
2
bed bed3+
2
bigBed broadPeak
1
bed bed3
1
bed bedMethyl
1
bigBed bedMethyl
1
tsv
Platform
2
Illumina Genome Analyzer II
2
Illumina HiSeq 2000
1
Illumina HiSeq 2500
1
Illumina NextSeq 500
Run type
4
single-ended
1
paired-ended
Read length (nt)
5
36
Library made from
5
DNA
Date released
June, 2019
3
October, 2017
2
November, 2018
Lab
5
AMP-T2D consortium
Replication type
5
unreplicated
Audit category:
2
missing controlled_by
month_released!
June, 2019
Showing 5 of 5 results
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Experiment
TSTSR479BAW
released
DNase-seq
of brain
Homo sapiens
brain embryo (80 days)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR021OZY
released
DNase-seq
of brain
Homo sapiens
brain male embryo (105 days)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR202522
released
ChIP-seq
of brain
Homo sapiens
brain female embryo (120 days)
Target:
H3K4me1
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR072271
released
Audit not_compliant
1
ChIP-seq
of brain
Homo sapiens
brain male embryo (122 days)
Target:
H3K36me3
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR409697
released
Audit not_compliant
1
ChIP-seq
of brain
Homo sapiens
brain male embryo (122 days)
Target:
H3K4me3
Lab:
AMP-T2D consortium
Project:
AMP