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Assay category
6
DNA binding
Assay
6
ChIP-seq
Project
6
AMP
RFA
6
AMP
Experiment status
6
released
Genome assembly (visualization)
6
GRCh38
6
hg19
Organism
6
Homo sapiens
Target of assay
12
histone
12
histone modification
6
broad histone mark
6
narrow histone mark
2
RNA binding protein
2
transcription factor
1
chromatin remodeller
Biosample type
6
primary cell
Life stage
6
unknown
Available data
6
bam
6
bed narrowPeak
6
bigBed narrowPeak
6
bigWig
6
fastq
5
bed broadPeak
5
bigBed broadPeak
5
tagAlign
Platform
4
Illumina Genome Analyzer IIe
3
Illumina Genome Analyzer IIx
1
Illumina HiSeq 2000
Run type
6
single-ended
1
paired-ended
Read length (nt)
6
36
1
76
Library made from
6
DNA
Date released
6
August, 2017
Lab
6
AMP-T2D consortium
Replication type
6
isogenic
Audit category:
1
inconsistent assembly
1
inconsistent control read length
1
inconsistent control run_type
Showing 6 of 6 results
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Experiment
TSTSR410352
released
Audit warning
3
ChIP-seq
of skeletal muscle myoblast
Homo sapiens
skeletal muscle myoblast male (22 years)
Target:
H3K4me3
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR689356
released
ChIP-seq
of skeletal muscle myoblast
Homo sapiens
skeletal muscle myoblast male (22 years)
Target:
H3K9ac
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR204688
released
ChIP-seq
of skeletal muscle myoblast
Homo sapiens
skeletal muscle myoblast male (22 years)
Target:
H3K4me3
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR098750
released
ChIP-seq
of skeletal muscle myoblast
Homo sapiens
skeletal muscle myoblast male (22 years)
Target:
H3K4me2
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR897624
released
ChIP-seq
of skeletal muscle myoblast
Homo sapiens
skeletal muscle myoblast male (22 years)
Target:
H3K27ac
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR752641
released
ChIP-seq
of skeletal muscle myoblast
Homo sapiens
skeletal muscle myoblast male (22 years)
Target:
H2AFZ
Lab:
AMP-T2D consortium
Project:
AMP