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Schema
Citing CMDGA
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Assay category
5
DNA accessibility
1
3D chromatin structure
Assay
5
ATAC-seq
1
Hi-C
Project
5
AMP
1
HPAP
RFA
5
AMP
1
HPAP
Experiment status
6
released
Genome assembly (visualization)
6
hg19
5
GRCh38
Organism
6
Homo sapiens
Biosample type
6
primary cell
Organ
6
epithelium
6
pancreas
Life stage
3
adult
2
unknown
1
child
Available data
29
bam
29
bigWig
26
fastq
16
tsv
13
bed narrowPeak
5
bigBed narrowPeak
zippedFastqFolder
1
bedpe bed3+
1
cool
1
hic
Platform
3
Illumina HiSeq 2000
2
Illumina NextSeq 500
Run type
5
paired-ended
Read length (nt)
3
102
2
41
2
50
Library made from
6
DNA
Date released
3
September, 2018
1
August, 2017
1
October, 2022
1
September, 2017
Lab
5
AMP-T2D consortium
1
Klaus Kaestner, Upenn
Replication type
5
unreplicated
1
anisogenic
Audit category:
1
audit script error
files.file_type!
zippedFastqFolder
Showing 6 of 6 results
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Experiment
DSR177NQH
released
Audit error
1
Hi-C
of pancreatic acinar cell
Homo sapiens
pancreatic acinar cell female adult (40 years) and female adult (58 years) and male adult (19 years) and male adult (35 years)
Lab:
Klaus Kaestner, Upenn
Project:
HPAP
Experiment
TSTSR438OMU
released
ATAC-seq
of pancreatic acinar cell
Homo sapiens
pancreatic acinar cell male child (17 months)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR611IIS
released
ATAC-seq
of pancreatic acinar cell
Homo sapiens
pancreatic acinar cell male adult (19 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR277WLP
released
ATAC-seq
of pancreatic acinar cell
Homo sapiens
pancreatic acinar cell male adult (20 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR927197
released
ATAC-seq
of pancreatic acinar cell
Homo sapiens
pancreatic acinar cell
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR318132
released
ATAC-seq
of pancreatic acinar cell
Homo sapiens
pancreatic acinar cell
Lab:
AMP-T2D consortium
Project:
AMP