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Citing CMDGA
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Assay category
2
DNA binding
1
DNA accessibility
Assay
2
ChIP-seq
1
DNase-seq
Project
3
AMP
RFA
3
AMP
Experiment status
3
released
Genome assembly (visualization)
3
hg19
1
GRCh38
Organism
3
Homo sapiens
Target of assay
11
histone
histone modification
6
broad histone mark
5
narrow histone mark
2
RNA binding protein
2
transcription factor
1
chromatin remodeller
Biosample type
3
primary cell
Life stage
3
unknown
Available data
6
bam
6
bigWig
5
fastq
4
bed narrowPeak
4
bigBed narrowPeak
3
bed broadPeak
3
bigBed broadPeak
1
bed bedMethyl
1
bigBed bedMethyl
1
tagAlign
1
tsv
Platform
1
Illumina Genome Analyzer
1
Illumina Genome Analyzer II
1
Illumina Genome Analyzer IIe
1
Illumina Genome Analyzer IIx
1
Illumina HiSeq 2000
Run type
3
single-ended
1
paired-ended
Read length (nt)
3
36
1
101
Library made from
3
DNA
Date released
3
August, 2017
Lab
3
AMP-T2D consortium
Replication type
3
isogenic
target.investigated_as!
histone modification
Showing 3 of 3 results
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Experiment
TSTSR251267
released
DNase-seq
of skeletal muscle myoblast
Homo sapiens
skeletal muscle myoblast
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR204469
released
ChIP-seq
of skeletal muscle myoblast
Homo sapiens
skeletal muscle myoblast male (22 years)
Target:
EZH2
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR132965
released
ChIP-seq
of skeletal muscle myoblast
Homo sapiens
skeletal muscle myoblast male (22 years)
Target:
CTCF
Lab:
AMP-T2D consortium
Project:
AMP