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Citing CMDGA
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Assay category
5
DNA binding
Assay
5
ChIP-seq
Project
5
AMP
RFA
5
AMP
Experiment status
5
released
Genome assembly (visualization)
5
GRCh38
5
hg19
Organism
5
Homo sapiens
Target of assay
49
transcription factor
30
histone
30
histone modification
16
broad histone mark
14
narrow histone mark
9
RNA binding protein
5
chromatin remodeller
1
other context
1
other post-translational modification
Biosample type
4
cell line
1
primary cell
Organ
4
liver
Life stage
4
child
1
unknown
Available data
36
bam
36
bed narrowPeak
36
bigWig
36
fastq
34
bigBed narrowPeak
5
bed broadPeak
5
bigBed broadPeak
Platform
3
Illumina Genome Analyzer IIx
1
Illumina Genome Analyzer
1
Illumina HiSeq 2000
Run type
5
single-ended
Read length (nt)
5
36
Library made from
5
DNA
Date released
4
November, 2017
1
August, 2017
Lab
5
AMP-T2D consortium
Replication type
5
isogenic
Audit category:
1
inconsistent control read length
Showing 5 of 5 results
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Experiment
TSTSR692238
released
ChIP-seq
of HepG2
Homo sapiens
HepG2
Target:
REST
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR538446
released
ChIP-seq
of HepG2
Homo sapiens
HepG2
Target:
REST
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR990620
released
ChIP-seq
of HepG2
Homo sapiens
HepG2
Target:
HDAC2
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR464403
released
Audit warning
1
ChIP-seq
of HepG2
Homo sapiens
HepG2
Target:
EZH2
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR204469
released
ChIP-seq
of skeletal muscle myoblast
Homo sapiens
skeletal muscle myoblast male (22 years)
Target:
EZH2
Lab:
AMP-T2D consortium
Project:
AMP