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Citing CMDGA
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Assay category
5
DNA accessibility
Assay
765
ChIP-seq
192
DNase-seq
5
ATAC-seq
4
FAIRE-seq
Project
5
AMP
RFA
5
AMP
Experiment status
5
released
Genome assembly (visualization)
5
hg19
2
GRCh38
Organism
5
Homo sapiens
Biosample type
3
tissue
2
in vitro differentiated cells
Organ
epithelium
22
pancreas
4
connective tissue
2
adipose tissue
1
liver
Life stage
3
unknown
2
adult
Available data
242
bed narrowPeak
151
bam
102
bigWig
64
xls
29
fastq
13
tsv
12
bed bed3
7
bed bedgraph
5
bigBed narrowPeak
4
bed bed3+
3
txt
2
bed broadPeak
Platform
2
Illumina HiSeq 4000
Run type
2
paired-ended
Read length (nt)
2
100
Library insert size (nt)
1
150-250
Library made from
5
DNA
Date released
3
October, 2019
2
August, 2017
Lab
5
AMP-T2D consortium
Replication type
3
anisogenic
2
unreplicated
organ_slims!
epithelium
Showing 5 of 5 results
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Experiment
DSR851WOP
released
ATAC-seq
of adipocyte
Homo sapiens
adipocyte
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR638AUV
released
ATAC-seq
of adipocyte
Homo sapiens
adipocyte
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR543YBS
released
ATAC-seq
of adipose tissue
Homo sapiens
adipose tissue
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR560092
released
ATAC-seq
of subcutaneous adipose tissue
Homo sapiens
subcutaneous adipose tissue female adult (53 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR622315
released
ATAC-seq
of right lobe of liver
Homo sapiens
right lobe of liver female adult (53 years)
Lab:
AMP-T2D consortium
Project:
AMP