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Citing CMDGA
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Assay
857
ChIP-seq
243
total RNA-seq
128
single cell RNA-seq
61
ATAC-seq
27
snATAC-seq
17
WGBS
12
DNase-seq
5
GRO-seq
4
RRBS
2
FAIRE-seq
1
Hi-C
1
pCHi-C
Project
6
AMP
RFA
6
AMP
Experiment status
6
released
Genome assembly (visualization)
5
hg18
Organism
6
Homo sapiens
Biosample type
5
in vitro differentiated cells
1
stem cell
Organ
1
adipose tissue
1
connective tissue
1
embryo
Life stage
6
unknown
Available data
31
tsv
6
fastq
5
bigWig
3
bedpe bed3+
2
bed bed3+
2
ibed
1
bam
Platform
5
Illumina HiSeq 2500
1
Illumina HiSeq 4000
Run type
5
single-ended
1
paired-ended
Read length (nt)
5
50
1
69
Library made from
6
DNA
Date released
5
January, 2018
1
August, 2018
Lab
6
AMP-T2D consortium
Replication type
6
unreplicated
Showing 6 of 6 results
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Experiment
TSTSR423QSN
released
pCHi-C
of white fat cell
Homo sapiens
white adipose cell
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR520547
released
GRO-seq
of Posterior foregut
Homo sapiens
Posterior foregut
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR171680
released
GRO-seq
of pancreatic endoderm
Homo sapiens
pancreatic endoderm
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR641241
released
GRO-seq
of primitive gut cell
Homo sapiens
primitive gut cell
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR626869
released
GRO-seq
of definitive endodermal cell
Homo sapiens
definitive endodermal cell
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR770475
released
GRO-seq
of hESC
Homo sapiens
hESC (embryoid body cell)
Lab:
AMP-T2D consortium
Project:
AMP