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Citing CMDGA
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Assay category
2
DNA binding
Assay
92
total RNA-seq
36
single cell RNA-seq
27
snATAC-seq
21
ATAC-seq
8
WGBS
5
GRO-seq
4
RRBS
2
ChIP-seq
1
Hi-C
1
pCHi-C
Project
2
AMP
RFA
2
AMP
Experiment status
2
released
Organism
2
Homo sapiens
Target of assay
1
broad histone mark
1
histone
1
histone modification
1
transcription factor
Biosample type
1
cell line
1
tissue
Organ
1
brain
1
liver
Life stage
1
child
1
embryonic
Available data
bam
1390
bigWig
1325
bed narrowPeak
857
fastq
801
bigBed narrowPeak
398
tagAlign
114
bed broadPeak
79
bigBed broadPeak
53
bed bed3+
3
tar
1
tagAlign bed3+
0
bed bed3
Platform
1
Illumina Genome Analyzer II
1
Illumina Genome Analyzer IIx
Run type
2
single-ended
Read length (nt)
2
36
Library made from
2
DNA
Date released
1
November, 2017
1
October, 2017
Lab
2
AMP-T2D consortium
Replication type
1
isogenic
1
unreplicated
Audit category:
1
missing controlled_by
files.file_type!
bam
Showing 2 of 2 results
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Experiment
TSTSR641802
released
ChIP-seq
of HepG2
Homo sapiens
HepG2
Target:
TBL1XR1
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR793865
released
Audit not_compliant
1
ChIP-seq
of brain
Homo sapiens
brain male embryo (122 days)
Target:
H3K9me3
Lab:
AMP-T2D consortium
Project:
AMP