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Citing CMDGA
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Assay category
8
3D chromatin structure
Assay
8
Hi-C
Project
8
AMP
RFA
7
AMP
1
AMP2
Experiment status
8
released
Genome assembly (visualization)
8
hg19
Organism
8
Homo sapiens
Biosample type
2
cell line
2
in vitro differentiated cells
2
primary cell
2
tissue
Organ
3
epithelium
2
blood vessel
2
vasculature
2
vein
1
heart
1
liver
1
musculature of body
1
pancreas
Life stage
adult
5
unknown
2
embryonic
1
child
Available data
8
hic
7
bedpe bed3+
4
bed bed3+
4
bigWig
4
hdf5
Library made from
8
DNA
Date released
4
October, 2019
2
March, 2020
1
August, 2021
1
November, 2019
Lab
7
AMP-T2D consortium
1
Bing Ren, UCSD
Replication type
4
unreplicated
2
anisogenic
2
isogenic
Audit category:
3
inconsistent ontology term
1
audit script error
replicates.library.biosample.life_stage!
adult
Showing 8 of 8 results
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Experiment
DSR744JJN
released
Hi-C
of HepG2
Homo sapiens
HepG2
Lab:
Bing Ren, UCSD
Project:
AMP
Experiment
DSR656CHU
released
Hi-C
of psoas muscle
Homo sapiens
psoas muscle male child (3 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR430XOJ
released
Hi-C
of endothelial cell of umbilical vein
Homo sapiens
endothelial cell of umbilical vein
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR786VPZ
released
Hi-C
of heart
Homo sapiens
heart embryo (57 days) and embryo (67 days)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR464RKE
released
Audit error
1
Hi-C
of cardiac precursors (cardiac muscle cell)
Homo sapiens
cardiac precursors (cardiac muscle cell)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR235SPD
released
Audit error
1
Hi-C
of cardiomyocytes (cardiac muscle cell)
Homo sapiens
cardiomyocytes (cardiac muscle cell)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR251SCT
released
Audit error
1
Hi-C
of endothelial cell of umbilical vein
Homo sapiens
endothelial cell of umbilical vein
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR433ZII
released
Audit error
1
Hi-C
of EndoC_BH1
Homo sapiens
EndoC_BH1
Lab:
AMP-T2D consortium
Project:
AMP