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Schema
Citing CMDGA
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Assay category
6
DNA methylation
Assay
1321
total RNA-seq
205
single cell RNA-seq
31
pCHi-C
18
small RNA-seq
14
ATAC-seq
6
WGBS
3
snDrop-seq
2
RNA microarray
Project
6
HPAP
2
AMP
RFA
6
HPAP
2
AMP
Experiment status
8
released
Organism
8
Homo sapiens
Biosample type
6
primary cell
2
tissue
Organ
7
epithelium
6
pancreas
2
kidney
Life stage
4
adult
2
child
2
unknown
Available data
84
txt
41
zippedFastqFolder
18
bam
17
bed bedMethyl
17
bigBed bedMethyl
17
bigWig
17
fastq
8
tsv
Platform
6
Illumina NovaSeq 6000
Run type
6
paired-ended
Read length (nt)
6
100
Library made from
6
DNA
2
RNA
Date released
6
February, 2021
2
December, 2019
Lab
6
Klaus Kaestner, Upenn
2
AMP-T2D consortium
Replication type
6
isogenic
2
unreplicated
Audit category:
2
audit script error
Showing 8 of 8 results
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Experiment
DSR163MXE
released
WGBS
of pancreatic alpha cell
Homo sapiens
pancreatic alpha cell male child (3 years)
Lab:
Klaus Kaestner, Upenn
Project:
HPAP
Experiment
DSR992DXL
released
WGBS
of pancreatic alpha cell
Homo sapiens
pancreatic alpha cell female adult (24 years)
Lab:
Klaus Kaestner, Upenn
Project:
HPAP
Experiment
DSR248ORP
released
WGBS
of pancreatic alpha cell
Homo sapiens
pancreatic alpha cell male adult (46 years)
Lab:
Klaus Kaestner, Upenn
Project:
HPAP
Experiment
DSR791IRT
released
WGBS
of pancreatic alpha cell
Homo sapiens
pancreatic alpha cell female child (14 years)
Lab:
Klaus Kaestner, Upenn
Project:
HPAP
Experiment
DSR622ITI
released
WGBS
of pancreatic alpha cell
Homo sapiens
pancreatic alpha cell female adult (24 years)
Lab:
Klaus Kaestner, Upenn
Project:
HPAP
Experiment
DSR892CSM
released
WGBS
of pancreatic alpha cell
Homo sapiens
pancreatic alpha cell male adult (29 years)
Lab:
Klaus Kaestner, Upenn
Project:
HPAP
Experiment
DSR479AEW
released
Audit error
1
RNA microarray
of kidney interstitium
Homo sapiens
kidney interstitium
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
DSR187TER
released
Audit error
1
RNA microarray
of renal glomerulus
Homo sapiens
renal glomerulus
Lab:
AMP-T2D consortium
Project:
AMP