Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Clear Filters
Assay category
6
Transcription
Assay
6
total RNA-seq
Project
6
AMP
RFA
6
AMP
Experiment status
6
released
Genome assembly (visualization)
6
GRCh38
6
hg19
Organism
6
Homo sapiens
Biosample type
6
in vitro differentiated cells
Organ
1
embryo
Life stage
5
embryonic
1
adult
Available data
6
bam
6
bigWig
6
fastq
6
tsv
Platform
14
Illumina HiSeq 2000
Illumina Genome Analyzer IIx
Run type
6
single-ended
Read length (nt)
6
100
Library insert size (nt)
112
>200
41
>100
6
225-275
1
150-250
1
>150
Library made from
6
RNA
Date released
6
February, 2018
Lab
6
AMP-T2D consortium
Replication type
5
unreplicated
1
anisogenic
files.platform.term_name!
Illumina Genome Analyzer IIx
Showing 6 of 6 results
table-tab-icon
matrix-icon
Download
Experiment
TSTSR524675
released
total RNA-seq
of pancreatic endoderm
Homo sapiens
pancreatic endoderm
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR338129
released
total RNA-seq
of posterior foregut
Homo sapiens
posterior foregut
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR983214
released
total RNA-seq
of primitive gut cell
Homo sapiens
primitive gut cell
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR308762
released
total RNA-seq
of definitive endodermal cell
Homo sapiens
definitive endodermal cell
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR787281
released
total RNA-seq
of embryonic stem cell
Homo sapiens
embryonic stem cell
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR520282
released
total RNA-seq
of islet precursor cell
Homo sapiens
islet precursor cell
Lab:
AMP-T2D consortium
Project:
AMP