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Assay category
1
DNA accessibility
1
DNA binding
Assay
1
ChIP-seq
1
FAIRE-seq
Project
2
AMP
RFA
2
AMP
Experiment status
2
released
Genome assembly (visualization)
2
hg19
1
GRCh38
Organism
2
Homo sapiens
Target of assay
1
histone
1
histone modification
1
narrow histone mark
Biosample type
1
cell line
1
tissue
Organ
1
liver
1
pancreas
Life stage
adult
1
child
1
unknown
Available data
2
bam
2
bed narrowPeak
2
bigBed narrowPeak
2
bigWig
2
fastq
1
bed broadPeak
1
bigBed broadPeak
Platform
327
Illumina HiSeq 2000
Illumina Genome Analyzer IIx
106
Illumina HiSeq 2500
103
Illumina Genome Analyzer
31
Illumina HiSeq 4000
26
Illumina Genome Analyzer II
21
Illumina NovaSeq 6000
16
Illumina Genome Analyzer IIe
14
Illumina NextSeq 500
8
HiSeq 1500
8
HiSeq HighOutput V4
7
MiSeq
2
Illumina Genome Analyzer I
1
Illumina HiSeq X Ten
Run type
2
single-ended
Read length (nt)
1
35
1
36
Library made from
2
DNA
Date released
1
August, 2017
1
November, 2017
Lab
2
AMP-T2D consortium
Replication type
1
isogenic
1
unreplicated
files.platform.term_name!
Illumina Genome Analyzer IIx
replicates.library.biosample.life_stage!
adult
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Experiment
TSTSR580557
released
ChIP-seq
of HepG2
Homo sapiens
HepG2
Target:
H3K4me3
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR121227
released
FAIRE-seq
of islet of Langerhans
Homo sapiens
islet of Langerhans male (53 years)
Lab:
AMP-T2D consortium
Project:
AMP