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Citing CMDGA
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Assay category
5
DNA binding
Assay
5
ChIP-seq
Project
5
AMP
RFA
5
AMP
Experiment status
5
released
Genome assembly (visualization)
4
GRCh38
4
hg19
Organism
5
Homo sapiens
Target of assay
5
histone
5
histone modification
4
broad histone mark
1
narrow histone mark
Biosample type
4
tissue
1
cell line
Organ
4
brain
1
liver
Life stage
4
embryonic
1
child
Available data
26
fastq
25
bam
18
bigWig
17
bed narrowPeak
8
bigBed narrowPeak
7
bed broadPeak
5
bigBed broadPeak
5
tagAlign
4
bed bed3+
Platform
16
Illumina Genome Analyzer IIx
14
Illumina Genome Analyzer IIe
11
Illumina HiSeq 2000
5
Illumina Genome Analyzer II
1
Illumina Genome Analyzer
Run type
5
single-ended
Read length (nt)
5
36
Library made from
5
DNA
Date released
4
October, 2017
1
November, 2017
Lab
5
AMP-T2D consortium
Replication type
4
unreplicated
1
isogenic
Audit category:
4
missing controlled_by
Audit category:
1
inconsistent control read length
Showing 5 of 5 results
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Experiment
TSTSR762932
released
Audit warning
1
ChIP-seq
of HepG2
Homo sapiens
HepG2
Target:
H3K27me3
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR072271
released
Audit not_compliant
1
ChIP-seq
of brain
Homo sapiens
brain male embryo (122 days)
Target:
H3K36me3
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR793865
released
Audit not_compliant
1
ChIP-seq
of brain
Homo sapiens
brain male embryo (122 days)
Target:
H3K9me3
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR625471
released
Audit not_compliant
1
ChIP-seq
of brain
Homo sapiens
brain male embryo (122 days)
Target:
H3K27me3
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR409697
released
Audit not_compliant
1
ChIP-seq
of brain
Homo sapiens
brain male embryo (122 days)
Target:
H3K4me3
Lab:
AMP-T2D consortium
Project:
AMP