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Schema
Citing CMDGA
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Assay category
4
DNA methylation
1
DNA binding
Assay
4
RRBS
1
ChIP-seq
Project
5
AMP
RFA
5
AMP
Experiment status
5
released
Genome assembly (visualization)
4
hg19
Organism
5
Homo sapiens
Target of assay
1
transcription factor
Biosample type
3
tissue
1
cell line
1
primary cell
Organ
2
liver
2
musculature of body
Life stage
3
adult
1
child
1
unknown
Available data
142
fastq
bam
113
bigWig
94
bed narrowPeak
64
bigBed narrowPeak
53
bed broadPeak
53
bigBed broadPeak
16
tagAlign
9
tsv
4
bed bedMethyl
4
bigBed bedMethyl
3
bed bed3+
Platform
218
Illumina NovaSeq 6000
39
Illumina HiSeq 4000
38
HiSeq HighOutput V4
10
Illumina HiSeq 2500
10
Illumina NextSeq 500
5
Illumina Genome Analyzer IIx
2
Illumina HiSeq 2000
1
Illumina Genome Analyzer II
Run type
5
single-ended
Read length (nt)
5
36
Library made from
5
DNA
Date released
4
August, 2017
1
November, 2017
Lab
5
AMP-T2D consortium
Replication type
5
isogenic
files.file_type!
bam
Showing 5 of 5 results
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Experiment
TSTSR641802
released
ChIP-seq
of HepG2
Homo sapiens
HepG2
Target:
TBL1XR1
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR335337
released
RRBS
of liver
Homo sapiens
liver female adult (83 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR745497
released
RRBS
of skeletal muscle tissue
Homo sapiens
skeletal muscle tissue male adult (71 year)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR621123
released
RRBS
of skeletal muscle tissue
Homo sapiens
skeletal muscle tissue female adult (83 years)
Lab:
AMP-T2D consortium
Project:
AMP
Experiment
TSTSR288454
released
RRBS
of skeletal muscle myoblast
Homo sapiens
skeletal muscle myoblast
Lab:
AMP-T2D consortium
Project:
AMP